An Atlas of the Base Inter-RNA Stacks Involved in Bacterial Translation
Biophysical chemistry 2024 Peer Reviewed
Zakir Ali, Teagan Kukhta, John F. Trant, Purshotam Sharma
Structural and Energetic Features of Base–Base Stacking Contacts in RNA
Journal of Chemical Information and Modeling 2023 Peer Reviewed
Zakir Ali, Ambika Goyal, Ayush Jhunjhunwala, Abhijit Mitra, John F. Trant, Purshotam Sharma
DOI: https://doi.org/10.1021/acs.jcim.2c01116
Occurrence and Classification of T-shaped Interactions Between Nucleobases in RNA Structures
RNA (Journal of the RNA Society) 2023 Peer Reviewed
Zakir Ali, Teagan Kukhta, Ayush Jhunjhunwala, John F. Trant, Purshotam Sharma
DOI: https://doi.org/10.1261/rna.079486.122
Structural Mapping of the Base Stacks Containing Post-transcriptionally Modified Bases in RNA.
The Journal of Physical Chemistry B 2023 Peer Reviewed
Zakir Ali, Sarabjeet Kaur, Teagan Kukhta, Abd Al-Aziz A. Abu-Saleh, Ayush Jhunjhunwala, Abhijit Mitra, John F. Trant, Purshotam Sharma
On the Nature of Nucleobase Stacking in RNA: A Comprehensive Survey of Its Structural Variability and a Systematic Classification of Associated Interactions.
Journal of Chemical Information and Modeling 2021 Peer Reviewed
Ayush Jhunjhunwala, Zakir Ali, Sohini Bhattacharya, Antarip Halder, Abhijit Mitra and Purshotam Sharma
DOI: 10.1021/acs.jcim.0c01225
